Haplogroup F (mtDNA)
Haplogroup F | |
---|---|
Possible time of origin | 43,400 YBP[1] |
Possible place of origin | Asia |
Ancestor | R9 |
Descendants | F1, F2, F3, F4 |
Defining mutations | 249d, 6392, 10310[2] |
Haplogroup F is a human mitochondrial DNA (mtDNA) haplogroup. The clade is most common in the Far East.
Haplogroup F is centered in Asia and appears throughout East Asia and Southeast Asia. It is not found in the Americas.[3] It is a descendant haplogroup of Haplogroup R.
Distribution
Fairly common in East Asia and Southeast Asia.[4][5][6][7][8][9][10][11][12][13][14][15][16][17][18] High frequencies occur in Lahu from Yunnan (33% - 77%, average 52%), Nicobar Islands (50%), Shors from Kemerovo Oblast of Siberia (41%), and Arunachal Pradesh, India (31%).[19] There is also an important frequency in Taiwanese aborigines, Khakas, Kets, Han Chinese (and, thus, nearly all of China), Lombok, Sumba, Thailand, and Vietnam. Its distribution extends with low frequency to the Tharu of southern Nepal and the Bashkirs of the southern Urals.[20][21][22]
Haplogroup F also occurs at low frequencies on the Comoros Islands (<10%).[23]
Table of Frequencies of MtDNA Haplogroup F
Population | Frequency | Count | Source | Subtypes |
---|---|---|---|---|
Lahu (Lancang, Yunnan) | 0.771 | 35 | Wen 2004 | F1a=18, F(xF1a, F1b, F1c, F2a)=9 |
Senoi (Malaysia) | 0.442 | 52 | Hill 2006 | F1a1a=23 |
Tujia (Yongshun, Hunan) | 0.433 | 30 | Wen 2004 | F(xF1a, F1b, F1c, F2a)=6, F1a=4, F1c=2, F1b=1 |
Shor (Kemerovo) | 0.415 | 82 | Derenko 2007 | F1=33, F2a=1 |
Lahu (Simao, Yunnan) | 0.344 | 32 | Wen 2004 | F1a=10, F2a=1 |
Lahu (Xishuangbanna, Yunnan) | 0.333 | 15 | Wen 2004 | F1a=3, F1b=1, F1c=1 |
Pan Yao (Tianlin, Guangxi) | 0.313 | 32 | Wen 2005 | F3=2, F1b=2, F1a1a=2, F1a1(xF1a1a)=2, F1a(xF1a1)=1, F1c=1 |
Yi (Hezhang County, Guizhou) | 0.300 | 20 | Li 2007 | F1b=4, F1a=2 |
Lingao (Hainan) | 0.290 | 31 | Peng 2011 | F(xF1, F2, F3, F4)=2, F2=2, F1(xF1a)=1, F1a1(xF1a1a)=1, F1a1a=1, F3=1, F4=1 |
Lowland Yao (Fuchuan, Guangxi) | 0.286 | 42 | Wen 2005 | F2a=4, F1a1(xF1a1a)=2, F1a(xF1a1)=2, F1b=1, F1c=1, F1(xF1a, F1b, F1c)=1, F3=1 |
Xiban Yao (Fangcheng, Guangxi) | 0.273 | 11 | Wen 2005 | F1b=1, F1a(xF1a1)=1, F(xF1, F2a, F3)=1 |
Lanten Yao (Tianlin, Guangxi) | 0.269 | 26 | Wen 2005 | F1a(xF1a1)=5, F1a1(xF1a1a)=1, F(xF1, F2a, F3)=1 |
Bai (Xishuangbanna, Yunnan) | 0.263 | 19 | Wen 2004 | F1a=2, F1b=2, F(xF1a, F1b, F1c, F2a)=1 |
Huatou Yao (Fangcheng, Guangxi) | 0.263 | 19 | Wen 2005 | F1a1a=2, F1a1(xF1a1a)=1, F1a(xF1a1)=1, F(xF1, F2a, F3)=1 |
Vietnamese | 0.262 | 42 | Jin 2009 | F1a=10, F(xF1a, F1b, F1c, F2)=1 |
Taiwan (aborigines) | 0.253 | 640 | Peng 2011 | F4=72, F3=54, F1a1(xF1a1a)=21, F1a(xF1a1)=14, F2=1 |
Bai (Dali, Yunnan) | 0.250 | 68 | Wen 2004 | F1a=6, F1c=4, F2a=4, F1b=2, F(xF1a, F1b, F1c, F2a)=1 |
Indonesian (Mataram, Lombok) | 0.250 | 44 | Hill 2007 | F1a1a=4, F1a(xF1a1, F1a3, F1a4, F1a5)=4, F1a3=1, F1a4=1, F(xF1a, F1b, F2, F3a, F3b, F4)=1 |
Uyghur (Uzbekistan/Kyrgyzstan) | 0.250 | 16 | Comas 2004 | F=4 |
Yi (Xishuangbanna, Yunnan) | 0.250 | 16 | Wen 2004 | F1b=2, F1a=1, F2a=1 |
Khakassian (Khakassia) | 0.246 | 57 | Derenko 2007 | F1=11, F2a=3 |
Naxi (Lijiang, Yunnan) | 0.244 | 45 | Wen 2004 | F1a=8, F1b=2, F2a=1 |
Bunu (Dahua & Tianlin, Guangxi) | 0.240 | 25 | Wen 2005 | F1b=2, F(xF1, F2a, F3)=1, F1a1(xF1a1a)=1, F1a1a=1, F3=1 |
Ket | 0.237 | 38 | Starikovskaya 2005 | F=9 |
Han (Beijing) | 0.225 | 40 | Jin 2009 | F1a=4, F(xF1a, F1b, F1c, F2)=3, F1b=2 |
Taiwanese (Taipei, Taiwan) | 0.220 | 91 | Umetsu 2005 | F=20 |
Han (Southwest China; pool of 44 Sichuan, 34 Chongqing, 33 Yunnan, & 26 Guizhou) | 0.219 | 137 | Ji 2012 | F1a=15, F2=8, F3=7 |
Hani (Xishuangbanna, Yunnan) | 0.212 | 33 | Wen 2004 | F1a=6, F1b=1 |
Tibetan (Shigatse, Tibet) | 0.207 | 29 | Ji 2012 | F1a=5, F1b=1 |
Tujia (Yanhe County, Guizhou) | 0.207 | 29 | Li 2007 | F1a=2, F1c=1, F2a3=1, F2b=1, F(xF1, F2)=1 |
Bapai Yao (Liannan, Guangdong) | 0.200 | 35 | Wen 2005 | F1b=3, F3=2, F1a1a=1, F1a(xF1a1)=1 |
Indonesian (Waingapu, Sumba) | 0.200 | 50 | Hill 2007 | F1a4=3, F1a3=2, F1a1a=2, F1a(xF1a1, F1a3, F1a4, F1a5)=1, F1a1(xF1a1a)=1, F3b=1 |
Manchurian | 0.200 | 40 | Jin 2009 | F(xF1a, F1b, F1c, F2)=3, F1a=2, F1b=2, F1c=1 |
Thai | 0.200 | 40 | Jin 2009 | F1b=8 |
Li (Hainan) | 0.197 | 346 | Peng 2011 | F1a1(xF1a1a)=30, F2=20, F1(xF1a)=4, F1a(xF1a1)=4, F1a1a=3, F3=3, F4=3, F(xF1, F2, F3, F4)=1 |
Han (Xinjiang) | 0.191 | 47 | Yao 2004 | F1a=2, F3=2, F1b=1, F1c=1, F2a2=1, F2a3=1, F4=1 |
Thailand | 0.190 | 105 | Kaewsutthi 2011 | F1=18, F(xF1)=2 |
Lisu (Gongshan, Yunnan) | 0.189 | 37 | Wen 2004 | F2a=4, F1b=2, F1a=1 |
Han (southern California) | 0.187 | 390 | Ji 2012 | F=73 |
Oirat Mongol (Xinjiang) | 0.184 | 49 | Yao 2004 | F2(xF2a2, F2a3, F2b)=3, F1b=3, F1a=2, F2b=1 |
Dong (Tianzhu County, Guizhou) | 0.179 | 28 | Li 2007 | F1a=4, F1b=1 |
Han (Taiwan) | 0.175 | 1117 | Ji 2012 | F=196 |
CHB (Han from Beijing Normal University) | 0.174 | 121 | Zheng 2011 | F=21 |
Jino (Xishuangbanna, Yunnan) | 0.167 | 18 | Wen 2004 | F1a=2, F1b=1 |
Nu (Gongshan, Yunnan) | 0.167 | 30 | Wen 2004 | F2a=5 |
Gelao (Daozhen County, Guizhou) | 0.161 | 31 | Li 2007 | F1a=3, F1(xF1a, F1b, F1c)=1, F(xF1, F2)=1 |
CHD (Han from Denver) | 0.151 | 73 | Zheng 2011 | F=11 |
Filipino (Palawan) | 0.150 | 20 | Scholes 2011 | F3b2=3 |
Indonesian (52 Pekanbaru, 42 Medan, 34 Bangka, 28 Palembang, & 24 Padang) | 0.150 | 180 | Hill 2007 | F1a1a=9, F1a(xF1a1, F1a3, F1a4, F1a5)=8, F1a5=3, F4=3, F1a3=2, F1a4=2 |
Kyrgyz (Uzbekistan/Kyrgyzstan) | 0.150 | 20 | Comas 2004 | F=3 |
Yi (Shuangbai, Yunnan) | 0.150 | 40 | Wen 2004 | F(xF1a, F1b, F1c, F2a)=2, F1a=2, F1b=2 |
Mongolian (Ulan Bator) | 0.149 | 47 | Jin 2009 | F1a=3, F1b=3, F2a=1 |
Borneo (89 Banjarmasin & 68 Kota Kinabalu) | 0.146 | 157 | Hill 2007 | F3b=9, F(xF1a, F1b, F2, F3a, F3b, F4)=4, F1a3=3, F1a4=3, F1a1(xF1a1a)=2, F1a(xF1a1, F1a3, F1a4, F1a5)=1, F1a1a=1 |
Indonesian (Bali) | 0.146 | 82 | Hill 2007 | F1a(xF1a1, F1a3, F1a4, F1a5)=5, F1a1(xF1a1a)=4, F1a1a=2, F(xF1a, F1b, F2, F3a, F3b, F4)=1 |
Hmong (Jishou, Hunan) | 0.146 | 103 | Wen 2005 | F1a1(xF1a1a)=4, F1a1a=3, F(xF1, F2a, F3)=3, F1a(xF1a1)=2, F1b=2, F3=1 |
Aini (Xishuangbanna, Yunnan) | 0.140 | 50 | Wen 2004 | F1a=6, F(xF1a, F1b, F1c, F2a)=1 |
Indonesian (Ambon) | 0.140 | 43 | Hill 2007 | F1a3=3, F1a4=2, F1a1a=1 |
Cun (Hainan) | 0.133 | 30 | Peng 2011 | F4=3, F1a1(xF1a1a)=1 |
Hui (Xinjiang) | 0.133 | 45 | Yao 2004 | F1b=2, F1c=2, F1a=1, F2a3=1 |
Batak (Palawan) | 0.129 | 31 | Scholes 2011 | F1a3=3, F3b2=1 |
Yi (Luxi, Yunnan) | 0.129 | 31 | Wen 2004 | F1b=3, F(xF1a, F1b, F1c, F2a)=1 |
Guoshan Yao (Jianghua, Hunan) | 0.125 | 24 | Wen 2005 | F1a(xF1a1)=1, F1b=1, F3=1 |
Tu Yao (Hezhou, Guangxi) | 0.122 | 41 | Wen 2005 | F1a1a=4, F1a(xF1a1)=1 |
Gelao (Daozhen County, Guizhou) | 0.118 | 102 | Liu 2011 | F1a(xF1a1)=4, F1b=3, F2(xF2a, F2b)=2, F3a=2, F3(xF3a)=1 |
Tibetan (Nagchu, Tibet) | 0.114 | 35 | Ji 2012 | F=4 |
Tibetan (Lhasa, Tibet) | 0.114 | 44 | Ji 2012 | F1a=2, F2=2, F1b=1 |
Filipino (Luzon) | 0.113 | 177 | Tabbada 2010 | F1a3=6, F1a4=6, F3b=5, F4b=2, F1a1a=1 |
Indonesian (Alor) | 0.111 | 45 | Hill 2007 | F1a4=3, F1a1a=1, F1a(xF1a1, F1a3, F1a4, F1a5)=1 |
Indonesian (Sulawesi, incl. 89 Manado, 64 Toraja, 46 Ujung Padang, & 38 Palu) | 0.110 | 237 | Hill 2007 | F1a4=12, F1a3=4, F1a(xF1a1, F1a3, F1a4, F1a5)=4, F1a1a=3, F1a1(xF1a1a)=1, F1a5=1, F1b=1 |
Tujia (western Hunan) | 0.109 | 64 | Wen 2004 | F(xF1a, F1b, F1c, F2a)=2, F1a=2, F1b=2, F1c=1 |
Cham (Bình Thuận, Vietnam) | 0.107 | 168 | Peng 2010 | F1a1a=10, F1(xF1a)=3, F1a(xF1a1)=3, F1a1(xF1a1a)=2 |
Tibetan (Shannan, Tibet) | 0.105 | 19 | Ji 2012 | F=2 |
Dingban Yao (Mengla, Yunnan) | 0.100 | 10 | Wen 2005 | F1a(xF1a1)=1 |
Filipino (Visayas) | 0.098 | 112 | Tabbada 2010 | F1a4=7, F1a3=3, F3b=1 |
Korean (South Korea) | 0.097 | 185 | Jin 2009 | F1a=8, F1b=8, F2(xF2a)=2 |
Korean (Seoul National University Hospital) | 0.096 | 633 | Fuku 2007 | F=61 |
Filipino | 0.094 | 64 | Tabbada 2010 | F1a3=3, F1a4=3 |
Mien (Shangsi, Guangxi) | 0.094 | 32 | Wen 2005 | F1a1(xF1a1a)=2, F1a1a=1 |
Tibetan (Tibet) | 0.093 | 216 | Ji 2012 | F1a=13, F1b=4, F2=3 |
CHS (Han from Hunan & Fujian) | 0.091 | 55 | Zheng 2011 | F=5 |
Buryat | 0.087 | 126 | Kong 2003 | F1b=6, F1a=3, F(xF1a, F1b, F1c, F2a)=2 |
Tofalar | 0.087 | 46 | Starikovskaya 2005 | F1b=4 |
Uzbek (Xinjiang) | 0.086 | 58 | Yao 2004 | F2a3=2, F4=2, F1b=1 |
Tuvinian (Tuva) | 0.086 | 105 | Derenko 2007 | F1=8, F2a=1 |
Japanese (Tōhoku) | 0.083 | 336 | Umetsu 2005 | F=28 |
Mongol (New Barag Left Banner) | 0.083 | 48 | Kong 2003 | F1a=2, F1c=1, F2a=1 |
Pumi (Ninglang, Yunnan) | 0.083 | 36 | Wen 2004 | F2a=2, F1b=1 |
Tibetan (Diqing, Yunnan) | 0.083 | 24 | Wen 2004 | F1a=1, F1b=1 |
Korean (northern China) | 0.078 | 51 | Jin 2009 | F(xF1a, F1b, F1c, F2)=1, F1a=1, F1b=1, F1c=1 |
JPT (Japanese from Tokyo) | 0.076 | 118 | Zheng 2011 | F=9 |
Kazakh (Xinjiang) | 0.075 | 53 | Yao 2004 | F1b=3, F2(xF2a2, F2a3, F2b)=1 |
Chinese (Shenyang, Liaoning) | 0.075 | 160 | Umetsu 2005 | F=12 |
Danga (Hainan) | 0.075 | 40 | Peng 2011 | F1a1(xF1a1a)=1, F2=1, F3=1 |
Japanese (northern Kyūshū) | 0.074 | 256 | Umetsu 2005 | F=19 |
Tibetan (Nyingchi, Tibet) | 0.074 | 54 | Ji 2012 | F1a=2, F1b=2 |
Uyghur | 0.073 | 55 | Yao 2004 | F1b=2, F1a=1, F1c=1 |
Filipino (Mindanao) | 0.071 | 70 | Tabbada 2010 | F3b=2, F1a4=2, F1a3=1 |
Korean (Seoul & Daejeon, South Korea) | 0.069 | 261 | Kim 2008 | F1=12, F(xF1)=6 |
Tibetan (Chamdo, Tibet) | 0.069 | 29 | Ji 2012 | F1a=2 |
Semelai (Malaysia) | 0.066 | 61 | Hill 2006 | F1a1a=4 |
Japanese (Hokkaidō) | 0.065 | 217 | Asari 2007 | F=14 |
Wuzhou Yao (Fuchuan, Guangxi) | 0.065 | 31 | Wen 2005 | F1a1(xF1a1a)=1, F3=1 |
Korean (South Korea) | 0.064 | 203 | Umetsu 2005 | F=13 |
Mongolian (Ulan Bator) | 0.064 | 47 | Derenko 2007 | F1=3 |
Uyghur (Xinjiang) | 0.064 | 47 | Yao 2004 | F1b=2, F1a=1 |
Bashkir (Beloretsky, Sterlibashevsky, Ilishevsky, & Perm) | 0.063 | 221 | Bermisheva 2002 | F=14 |
Dungan (Uzbekistan/Kyrgyzstan) | 0.063 | 16 | Comas 2004 | F=1 |
Japanese (Miyazaki) | 0.060 | 100 | Uchiyama 2007 | F1b=3, F1a=2, F2a=1 |
Tharu (Chitwan, Nepal) | 0.060 | 133 | Fornarino 2009 | F1c=7, F1(xF1c, F1d)=1 |
Japanese (Gifu) | 0.059 | 1617 | Fuku 2007 | F=96 |
Japanese (Tōkai) | 0.057 | 282 | Umetsu 2005 | F=16 |
Teleut (Kemerovo) | 0.057 | 53 | Derenko 2007 | F1=3 |
Altai Kizhi | 0.056 | 90 | Derenko 2007 | F1=3, F2a=2 |
Kalmyk (Kalmykia) | 0.055 | 110 | Derenko 2007 | F1=6 |
Tibetan (Shannan, Tibet) | 0.055 | 55 | Ji 2012 | F1a=2, F2=1 |
Tibetan (Qinghai) | 0.054 | 56 | Wen 2004 | F1c=2, F1a=1 |
Japanese | 0.052 | 211 | Maruyama 2003 | F1b=9, F1a=2 |
Hmong (Wenshan, Yunnan) | 0.051 | 39 | Wen 2005 | F1b=1, F3=1 |
Kazakh (Kosh-Agach, Altai Republic) | 0.051 | 98 | Derenko 2012 | F1=5 |
Karakalpak (Uzbekistan/Kyrgyzstan) | 0.050 | 20 | Comas 2004 | F=1 |
Tharu (Morang, Nepal) | 0.050 | 40 | Fornarino 2009 | F1c=1, F1d=1 |
Turkmen (Uzbekistan/Kyrgyzstan) | 0.050 | 20 | Comas 2004 | F=1 |
Korean (South Korea) | 0.049 | 103 | Derenko 2007 | F1=5 |
Oroqen (Oroqen Autonomous Banner) | 0.045 | 44 | Kong 2003 | F1b=2 |
Yakut | 0.043 | 117 | Kong 2003 | F2a=3, F1b=2 |
Tuvan | 0.042 | 95 | Starikovskaya 2005 | F(xF1b)=3, F1b=1 |
Kyrgyz (Talas) | 0.042 | 48 | Yao 2004 | F1a=1, F1b=1 |
Tibetan (Nyingchi, Tibet) | 0.042 | 24 | Ji 2012 | F=1 |
Khamnigan (Buryatia) | 0.040 | 99 | Derenko 2007 | F1=4 |
Iu Mien (Mengla, Yunnan) | 0.037 | 27 | Wen 2005 | F(xF1, F2a, F3)=1 |
Kazakh | 0.036 | 55 | Yao 2004 | F1b=2 |
Barghut (Hulunbuir) | 0.034 | 149 | Derenko 2012 | F1=4, F2=1 |
Buryat (Buryatia) | 0.031 | 295 | Derenko 2007 | F1=7, F2a=2 |
Tibetan (Zhongdian, Yunnan) | 0.029 | 35 | Wen 2004 | F2a=1 |
Kim Mun (Malipo, Yunnan) | 0.025 | 40 | Wen 2005 | F1a1(xF1a1a)=1 |
Uzbek (Uzbekistan/Kyrgyzstan) | 0.025 | 40 | Comas 2004 | F=1 |
Okinawa | 0.025 | 326 | Umetsu 2005 | F=8 |
Evenk (New Barag Left Banner) | 0.021 | 47 | Kong 2003 | F1c=1 |
Ainu | 0.020 | 51 | Sato 2009 | F1b=1 |
Evenk (53 Stony Tunguska basin & 18 Tugur-Chumikan) | 0.014 | 71 | Starikovskaya 2005 | F1b=1 |
Telenghit (Altai Republic) | 0.014 | 71 | Derenko 2007 | F1=1 |
Tubalar | 0.014 | 72 | Starikovskaya 2005 | F1b=1 |
Evenk (Krasnoyarsk) | 0.014 | 73 | Derenko 2007 | F1=1 |
Ulchi (Old & New Bulava, Ulchsky, Khabarovsk) | 0.011 | 87 | Starikovskaya 2005 | F(xF1b)=1 |
Mansi | 0.010 | 98 | Starikovskaya 2005 | F=1 |
Khanty | 0.009 | 106 | Pimenoff 2008 | F1=1 |
Chukchi (Anadyr) | 0.000 | 15 | Derenko 2007 | - |
Bukharan Arab (Uzbekistan/Kyrgyzstan) | 0.000 | 20 | Comas 2004 | - |
Crimean Tatar (Uzbekistan/Kyrgyzstan) | 0.000 | 20 | Comas 2004 | - |
Iranian (Uzbekistan/Kyrgyzstan) | 0.000 | 20 | Comas 2004 | - |
Kazakh (Uzbekistan/Kyrgyzstan) | 0.000 | 20 | Comas 2004 | - |
Tajik (Uzbekistan/Kyrgyzstan) | 0.000 | 20 | Comas 2004 | - |
Hindu (Chitwan, Nepal) | 0.000 | 24 | Fornarino 2009 | - |
Nganasan | 0.000 | 24 | Starikovskaya 2005 | - |
Buryat (Kushun, Nizhneudinsk, Irkutsk Oblast) | 0.000 | 25 | Starikovskaya 2005 | - |
Kurd (northwestern Iran) | 0.000 | 25 | Derenko 2007 | - |
Andhra Pradesh (tribal) | 0.000 | 29 | Fornarino 2009 | - |
Batek (Malaysia) | 0.000 | 29 | Hill 2006 | - |
Mendriq (Malaysia) | 0.000 | 32 | Hill 2006 | - |
Negidal | 0.000 | 33 | Starikovskaya 2005 | - |
Temuan (Malaysia) | 0.000 | 33 | Hill 2006 | - |
Yakut (Yakutia) | 0.000 | 36 | Derenko 2007 | - |
Tibetan (Deqin, Yunnan) | 0.000 | 40 | Wen 2004 | - |
Tajik (Tajikistan) | 0.000 | 44 | Derenko 2007 | - |
Daur (Evenk Autonomous Banner) | 0.000 | 45 | Kong 2003 | - |
Evenk (Buryatia) | 0.000 | 45 | Derenko 2007 | - |
Udege (Gvasiugi, Imeni Lazo, Khabarovsk) | 0.000 | 46 | Starikovskaya 2005 | - |
Itelmen | 0.000 | 47 | Starikovskaya 2005 | - |
Kyrgyz (Sary-Tash) | 0.000 | 47 | Yao 2004 | - |
Korean (Arun Banner) | 0.000 | 48 | Kong 2003 | - |
Jahai (Malaysia) | 0.000 | 51 | Hill 2006 | - |
Nivkh (northern Sakhalin) | 0.000 | 56 | Starikovskaya 2005 | - |
Mansi | 0.000 | 63 | Pimenoff 2008 | - |
Chukchi | 0.000 | 66 | Starikovskaya 2006 | - |
Siberian Eskimo | 0.000 | 79 | Starikovskaya 2005 | - |
Persian (eastern Iran) | 0.000 | 82 | Derenko 2007 | - |
Koryak | 0.000 | 155 | Starikovskaya 2005 | - |
Subclades
F1a clearly predominates among the representatives of haplogroup F in Southeast Asia, but subclades of this haplogroup have been found in populations as far north as the Buryats of Siberia.
F1b tends to become more frequent as a fraction of total F in populations of the northern parts of East Asia and Central Asia, such as Mongols, Kazakhs, Uyghurs, and Japanese, but it is most frequent as a fraction of the total population in areas inhabited by Tai peoples, such as Thailand, Guangxi, and southern Yunnan. It is also notably frequent among the Yi people. There are odd exclaves of F1b in Gaininsk Bashkirs of Perm Oblast and Croats of Hvar Island.[20][24]
F2 has been found mainly in the form of F2a, which has been observed in more than 10% of a couple samples of Nu and Lisu from Gongshan, Yunnan.[9] F2 has been found with frequencies exceeding 5% in several other populations of Southwest China, Guangxi, and Hainan, including the Han majority population. Outside of southwestern China, F2 has been found with frequency greater than 5% in a sample of Oirat Mongols from Xinjiang and a sample of Khakas from Khakassia, with the former population boasting particularly high diversity within this clade.
F3 is especially common among Austronesian peoples of Taiwan and the Malay Archipelago, but it also has been found in many populations of Southwest China and South-Central China, and in a sample of Hans from Xinjiang.
F4 has been found mainly in aboriginal populations of Taiwan and Hainan, with some representatives among samples of Filipinos from Luzon, Indonesians from Sumatra, and Hans and Uzbeks from Xinjiang.
Tree
This phylogenetic tree of haplogroup F subclades is based on the paper by Mannis van Oven and Manfred Kayser Updated comprehensive phylogenetic tree of global human mitochondrial DNA variation[2] and subsequent published research.
- F
- F1
- F1a'c
- F1a
- F1a1
- F1a1a
- F1a1a1
- F1a1b
- F1a1c
- F1a1a
- F1a2
- F1a3
- F1a1
- F1c
- F1b
- F1b1
- F1b1a
- F1b1a1
- F1b1a1a
- F1b1a2
- F1b1a1
- F1b1a
- F1b1
- F1d
- F1a
- F1a'c
- F2
- F2a
- F2a1
- F2a2
- F2a3
- F2b
- F2c
- F2a
- F3 (formerly R9a)
- F3a
- F3b
- F3b1
- F4
- F4a
- F4a1
- F4b
- F4a
- F1
See also
References
- ↑ Soares, P; Ermini, L; Thomson, N; Mormina, M; Rito, T; Röhl, A; Salas, A; Oppenheimer, S; MacAulay, V (2009). "Correcting for Purifying Selection: An Improved Human Mitochondrial Molecular Clock". American Journal of Human Genetics. 84 (6): 740–59. doi:10.1016/j.ajhg.2009.05.001. PMC 2694979. PMID 19500773.
- 1 2 van Oven, Mannis; Manfred Kayser (13 Oct 2008). "Updated comprehensive phylogenetic tree of global human mitochondrial DNA variation". Human Mutation. 30 (2): E386–E394. doi:10.1002/humu.20921. PMID 18853457. Retrieved 2009-05-20.
- ↑ Haplogroup F.
- ↑ David Comas, Stephanie Plaza, R. Spencer Wells et al., "Admixture, migrations, and dispersals in Central Asia: evidence from maternal DNA lineages", European Journal of Human Genetics (2004) 12, 495–504. doi:10.1038/sj.ejhg.5201160
- ↑ Starikovskaya, E. B., Sukernik, R. I., Derbeneva, O. A., Volodko, N. V., Ruiz-Pesini, E., Torroni, A., Brown, M. D., Lott, M. T., Hosseini, S. H., Huoponen, K. and Wallace, D. C. (2005), "Mitochondrial DNA Diversity in Indigenous Populations of the Southern Extent of Siberia, and the Origins of Native American Haplogroups." Annals of Human Genetics, 69: 67–89. doi:10.1046/j.1529-8817.2003.00127.x
- ↑ Catherine Hill, Pedro Soares, Maru Mormina et al., "Phylogeography and Ethnogenesis of Aboriginal Southeast Asians", Mol. Biol. Evol. 23(12) 2480–2491. (2006) doi:10.1093/molbev/msl124 PMID 16982817
- ↑ Catherine Hill, Pedro Soares, Maru Mormina et al., "A Mitochondrial Stratigraphy for Island Southeast Asia", Am. J. Hum. Genet. 2007;80:29–43.
- ↑ Asari M et al., "Utility of haplogroup determination for forensic mtDNA analysis in the Japanese population", Leg Med (2007), doi:10.1016/j.legalmed.2007.01.007
- 1 2 Bo Wen, Xuanhua Xie, Song Gao et al., "Analyses of Genetic Structure of Tibeto-Burman Populations Reveals Sex-Biased Admixture in Southern Tibeto-Burmans", Am. J. Hum. Genet. 74:856–865 (2004)
- ↑ Bo Wen, Hui Li, Song Gao et al., "Genetic Structure of Hmong-Mien Speaking Populations in East Asia as Revealed by mtDNA Lineages", Mol. Biol. Evol. 22(3) 725–734. (2005) doi:10.1093/molbev/msi055
- ↑ Derenko M, Malyarchuk B, Denisova G, Perkova M, Rogalla U, et al. (2012), "Complete Mitochondrial DNA Analysis of Eastern Eurasian Haplogroups Rarely Found in Populations of Northern Asia and Eastern Europe." PLoS ONE 7(2) e32179. doi:10.1371/journal.pone.0032179
- ↑ Sayaka Maruyama, Kiyoshi Minaguchi, and Naruya Saitou, "Sequence polymorphisms of the mitochondrial DNA control region and phylogenetic analysis of mtDNA lineages in the Japanese population", Int J Legal Med (2003) 117 : 218–225 doi:10.1007/s00414-003-0379-2
- ↑ Supannee Kaewsutthi, Nopasak Phasukkijwatana, Yutthana Joyjinda et al., "Mitochondrial Haplogroup Background May Influence Southeast Asian G11778A Leber Hereditary Optic Neuropathy", Investigative Ophthalmology & Visual Science, June 2011, Vol. 52, No. 7
- ↑ Min-Sheng Peng, Huy Ho Quang, Khoa Pham Dang et al., "Tracing the Austronesian Footprint in Mainland Southeast Asia: A Perspective from Mitochondrial DNA", Mol. Biol. Evol. 27(10) 2417–2430. 2010 doi:10.1093/molbev/msq131
- ↑ Noriyuki Fuku, Kyong Soo Park, Yoshiji Yamada et al., "Mitochondrial Haplogroup N9a Confers Resistance against Type 2 Diabetes in Asians", Am. J. Hum. Genet. 2007; 80:407–415. doi:10.1086/512202
- ↑ Kim W, Yoo T-K, Shin D-J, Rho H-W, Jin H-J, et al. (2008) "Mitochondrial DNA Haplogroup Analysis Reveals no Association between the Common Genetic Lineages and Prostate Cancer in the Korean Population." PLoS ONE 3(5) e2211. doi:10.1371/journal.pone.0002211
- ↑ Taketo Uchiyama, Rinnosuke Hisazumi, Kenshi Shimizu et al., "Mitochondrial DNA Sequence Variation and Phylogenetic Analysis in Japanese Individuals from Miyazaki Prefecture", Japanese Journal of Forensic Science and Technology 01/2007; 12(1) 83-96. doi:10.3408/jafst.12.83
- ↑ Kristina A. Tabbada, Jean Trejaut, Jun-Hun Loo et al., "Philippine Mitochondrial DNA Diversity: A Populated Viaduct between Taiwan and Indonesia?", Mol. Biol. Evol. 27(1) 21–31. (2010) doi:10.1093/molbev/msp215 PMID 19755666
- ↑ Derenko, Miroslava 2007 Phylogeographic Analysis of Mitochondrial DNA in Northern Asian Populations The American Journal of Human Genetics 81, 5, Nov 07, 1025–1041
- 1 2 M. A. Bermisheva, K. Tambets, R. Villems, and E. K. Khusnutdinova, "Diversity of Mitochondrial DNA Haplogroups in Ethnic Populations of the Volga–Ural Region", Molecular Biology, Vol. 36, No. 6, 2002, pp. 802–812. Translated from Molekulyarnaya Biologiya, Vol. 36, No. 6, 2002, pp. 990–1001.
- ↑ Simona Fornarino, Maria Pala, Vincenza Battaglia et al., "Mitochondrial and Y-chromosome diversity of the Tharus (Nepal): a reservoir of genetic variation", BMC Evolutionary Biology 2009, 9:154 doi:10.1186/1471-2148-9-154 PMID 19573232
- ↑ Ville N Pimenoff, David Comas, Jukka U Palo et al., "Northwest Siberian Khanty and Mansi in the junction of West and East Eurasian gene pools as revealed by uniparental markers", European Journal of Human Genetics (2008) 16, 1254–1264; doi:10.1038/ejhg.2008.101
- ↑ Msaidie, Said; et al. (2011). "Genetic diversity on the Comoros Islands shows early seafaring as major determinant of human biocultural evolution in the Western Indian Ocean" (PDF). European Journal of Human Genetics. 19: 89–94. doi:10.1038/ejhg.2010.128. Retrieved 1 October 2016.
- ↑ Helle-Viivi Tolk, Lovorka Barac, Marijana Pericic et al., "The evidence of mtDNA haplogroup F in a European population and its ethnohistoric implications", European Journal of Human Genetics (2001) 9, 717–723.
External links
- General
- Ian Logan's Mitochondrial DNA Site
- Mannis van Oven's Phylotree
- Haplogroup F
Phylogenetic tree of human mitochondrial DNA (mtDNA) haplogroups | |||||||||||||||||||||||||||||||||||||
Mitochondrial Eve (L) | |||||||||||||||||||||||||||||||||||||
L0 | L1–6 | ||||||||||||||||||||||||||||||||||||
L1 | L2 | L3 | L4 | L5 | L6 | ||||||||||||||||||||||||||||||||
M | N | ||||||||||||||||||||||||||||||||||||
CZ | D | E | G | Q | O | A | S | R | I | W | X | Y | |||||||||||||||||||||||||
C | Z | B | F | R0 | pre-JT | P | U | ||||||||||||||||||||||||||||||
HV | JT | K | |||||||||||||||||||||||||||||||||||
H | V | J | T |